DNA Binding Motif
| Accessions: | MA0494.2 (JASPAR 2024) |
| Names: | Nr1h3::Rxra |
| Organisms: | Mus musculus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 16 |
| Consensus: | TGaCCtvrrGTrACCy |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0 50 28 1191 T 02 140 30 1089 10 G 03 738 243 137 151 a 04 246 971 0 52 C 05 58 1080 3 128 C 06 78 313 128 750 t 07 358 318 343 250 v 08 374 257 336 302 r 09 794 0 321 154 r 10 278 19 903 69 G 11 77 0 4 1188 T 12 559 77 440 193 r 13 900 177 192 0 A 14 255 962 20 32 C 15 117 1040 0 112 C 16 11 502 42 714 y |
| Type: | Heterodimer |
| Binding TFs: | Q9Z0Y9 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains)) Q9Z0Y9 |
| Binding Sites: | MA0494.2.1 MA0494.2.10 MA0494.2.11 MA0494.2.12 MA0494.2.13 MA0494.2.14 MA0494.2.15 MA0494.2.16 MA0494.2.17 MA0494.2.18 MA0494.2.19 MA0494.2.2 MA0494.2.20 MA0494.2.3 MA0494.2.4 MA0494.2.5 MA0494.2.6 MA0494.2.7 MA0494.2.8 MA0494.2.9 |
| Publications: | Shen Q, Bai Y, Chang K.C, Wang Y, Burris T.P, Freedman L.P, Thompson C.C, Nagpal S. Liver X receptor-retinoid X receptor (LXR-RXR) heterodimer cistrome reveals coordination of LXR and AP1 signaling in keratinocytes. The Journal of biological chemistry 286:14554-63 (2011). [Pubmed] |
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