DNA Binding Motif

						

			
Accessions: HSFY1_methyl_1 (HT-SELEX2 May2017)

			
Names: HSFY1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 19
Consensus: rCATTCyAAACATTCyAhw
Weblogo: 
PSSM: P0      A      C      G      T
01   4605   2684   3616    545      r
02    348  11120    636    191      C
03  10801     99   2237      2      A
04     12     28      0  11442      T
05      9     10      0  11449      T
06      7  11449     15      0      C
07      2   5565    858   5774      y
08  11325      1    213    362      A
09  10791    137      6   1597      A
10   9510   1110    295   1325      A
11    104  11295    537     54      C
12  10716     33   2351      2      A
13      3     81      0  11426      T
14      0      6      1  11447      T
15      0  11449      0      2      C
16      1   7185    442   4194      y
17   9568    219   2333   1404      A
18   3955   3778     55   5776      h
19   3322   2770   1986   3372      w
Binding TFs: HSFY1 (HSF-type DNA-binding)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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