DNA Binding Motif

						

			
Accessions: PAX4_DBD (HumanTF 1.0)

			
Names: PAX4
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 4
Length: 8
Consensus: ctAATTAr
Weblogo: 
PSSM: P0      A      C      G      T
01    272    920    208    428      c
02    166     57    351    920      t
03    920     30      9     15      A
04    920      3      6      0      A
05      7      7      0    920      T
06     18     17     42    920      T
07    920    164     62     91      A
08    596    220    920    148      r
Binding TFs: PAX4_DBD (Homeobox domain, 'Paired box' domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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