DNA Binding Motif

						

			
Accessions: 2mf8_A (3D-footprint 20231221)

			
Names: Myelin transcription factor 1
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: HADDOCK model of MyT1 F4F5 - DNA complex
Length: 7
Consensus: aAAgTTc
Weblogo: 
PSSM: P0      A      C      G      T
01     57     13     13     13      a
02     96      0      0      0      A
03     96      0      0      0      A
04     13     13     56     14      g
05      0      0      0     96      T
06      0      0      0     96      T
07     19     39     19     19      c
Binding TFs: 2mf8_A (Zinc finger, C2HC type)
Binding Sites: 2mf8_B
2mf8_C
			
Publications: Gamsjaeger R, O'Connell M.R, Cubeddu L, Shepherd N.E, Lowry J.A, Kwan A.H, Vandevenne M, Swanton M.K, Matthews J.M, Mackay J.P. A structural analysis of DNA binding by myelin transcription factor 1 double zinc fingers. The Journal of biological chemistry 288:35180-91 (2013). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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