DNA Binding Motif

						

			
Accessions: ELK1_EOMES_1 (HumanTF2 1.0)

			
Names: ELK1_EOMES
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 29
Consensus: rrGyGygrrrryrgkrtsrCrCCGGAAgy
Weblogo: 
PSSM: P0      A      C      G      T
01    852    448    566    247      r
02    760    428   1352    465      r
03    106    266   1464    117      G
04     62    756    110   1408      y
05     26      3   1530     19      G
06    281    460    209    580      y
07    313    681   1347    778      g
08   1439    109    644    232      r
09    510    353    536    131      r
10    468    215    489    357      r
11    385    315    449    381      r
12    211    402    373    543      y
13    547    199    469    316      r
14    346    306    584    293      g
15    213    262    561    494      k
16    429    216    565    320      r
17    248    507    237   1431      t
18    299    527    536    168      s
19    552    166    525    287      r
20     35   1476     34     74      C
21   1474     22    940      4      r
22    121   1491    310     74      C
23    330   1492     24      0      C
24      1      1   1530      0      G
25      0      0   1530      1      G
26   1530     12      1     31      A
27   1394     79      0    470      A
28    493    353   1347     26      g
29    237    628    295    857      y
Type: Heterodimer
Binding TFs: ELK1_TF2 (Ets-domain)
ELK1_Full (Ets-domain)
EOMES_TF2 (T-box)
ELK1_TF1 (Ets-domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.