DNA Binding Motif

						

			
Accessions: 3ikt_B (3D-footprint 20231221)

			
Names: Redox-sensing transcriptional repressor rex
Organisms: strain HB27 / ATCC BAA-163 / DSM 7039, Thermus thermophilus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of a Rex-family repressor/DNA/NAD+ complex from Thermus aquaticus
Length: 7
Consensus: TCACAGC
Weblogo: 
PSSM: P0      A      C      G      T
01     11      9      9     67      T
02      0     96      0      0      C
03     96      0      0      0      A
04      0     96      0      0      C
05     96      0      0      0      A
06     11      9     67      9      G
07      9     67     11      9      C
Binding TFs: 3ikt_B (CoA binding domain, Putative DNA-binding protein N-terminus)
Binding Sites: 3ikt_C / 3ikt_D
			
Publications: McLaughlin K.J, Strain-Damerell C.M, Xie K, Brekasis D, Soares A.S, Paget M.S, Kielkopf C.L. Structural basis for NADH/NAD+ redox sensing by a Rex family repressor. Molecular cell 38:563-75 (2010). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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