DNA Binding Motif

						

			
Accessions: Gbx1_DBD (HumanTF 1.0)

			
Names: Gbx1
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 2
Length: 10
Consensus: rcyAATTArs
Weblogo: 
PSSM: P0      A      C      G      T
01  13049   9882  11341   7555      r
02   5646  18411   7528  10241      c
03   2074  22908    481  18918      y
04  41827   2814   1677   1776      A
05  41827    649      0     54      A
06      0      0     67  41827      T
07   1334   2002   1672  41827      T
08  41827    544    258   1918      A
09  13728   8864  13589   5645      r
10   9137  14392  10898   7399      s
Binding TFs: Gbx1_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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