DNA Binding Motif

						

			
Accessions: 1gxp_A (3D-footprint 20231221)

			
Names: PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTEIN
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: PhoB effector domain in complex with pho box DNA.
Length: 10
Consensus: CTtTnngACA
Weblogo: 
PSSM: P0      A      C      G      T
01      6     84      3      3      C
02      6      3      3     84      T
03     14     20     11     51      t
04      0      0      0     96      T
05     24     24     24     24      n
06     24     24     24     24      n
07     20     14     59      3      g
08     96      0      0      0      A
09      0     96      0      0      C
10     87      3      3      3      A
Binding TFs: 1gxp_A (Transcriptional regulatory protein, C terminal)
Binding Sites: 1gxp_C
1gxp_D
			
Publications: Blanco AG., Sola M., Gomis-Ruth FX., Coll M. Tandem DNA recognition by PhoB, a two-component signal transduction transcriptional activator. Structure. 10(5):701-13 (2002). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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