DNA Binding Motif

						

			
Accessions: NPAS2_methyl_1 (HT-SELEX2 May2017)

			
Names: NPAS2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: rmCAyGyGyh
Weblogo: 
PSSM: P0      A      C      G      T
01   2727    382   3550   1400      r
02   5254   2805   1579    133      m
03     15   8059      0      0      C
04   8059      0    444      0      A
05      0   2694      0   5365      y
06   1830      0   8059      0      G
07      0   3553      0   4506      y
08    136      0   8059      0      G
09    232   2703   1711   5357      y
10   2600   2212    999   2247      h
Binding TFs: NPAS2 (Helix-loop-helix DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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