DNA Binding Motif

Accessions: MA2175.1 (JASPAR 2024)
Names: mxl-1
Organisms: Caenorhabditis elegans
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 8
Consensus: cCACGTGg
Weblogo:
PSSM: P0 A C G T
01 70 273 49 43 c
02 15 403 4 13 C
03 376 15 29 15 A
04 14 401 4 16 C
05 16 4 401 14 G
06 24 29 16 366 T
07 14 4 402 15 G
08 50 49 269 67 g
Binding TFs: G5EEH5
Binding Sites: MA2175.1.12
MA2175.1.19 / MA2175.1.8
MA2175.1.9
MA2175.1.6
MA2175.1.10
MA2175.1.17
MA2175.1.16
MA2175.1.20
MA2175.1.5
MA2175.1.18 / MA2175.1.7
MA2175.1.1
MA2175.1.11
MA2175.1.13
MA2175.1.14
MA2175.1.15
MA2175.1.2
MA2175.1.3
MA2175.1.4
Publications: Yuan J, Tirabassi RS, Bush AB, Cole MD. The C. elegans MDL-1 and MXL-1 proteins can functionally substitute for vertebrate MAD and MAX 17:1109-18 (Oncogene.). [Pubmed]

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