DNA Binding Motif

						

			
Accessions: 1awc_A (3D-footprint 20231221)

			
Names: PROTEIN (GA BINDING PROTEIN ALPHA)
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: MOUSE GABP ALPHA/BETA DOMAIN BOUND TO DNA
Length: 6
Consensus: cGGAAg
Weblogo: 
PSSM: P0      A      C      G      T
01     13     57     13     13      c
02      0      0     96      0      G
03      0      0     96      0      G
04     96      0      0      0      A
05     96      0      0      0      A
06     16     13     54     13      g
Binding TFs: 1awc_A (Ets-domain)
Binding Sites: 1awc_D
1awc_E
			
Publications: Batchelor A.H, Piper D.E, de la Brousse F.C, McKnight S.L, Wolberger C. The structure of GABPalpha/beta: an ETS domain- ankyrin repeat heterodimer bound to DNA. Science (New York, N.Y.) 279:1037-41 (1998). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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