DNA Binding Motif

						

			
Accessions: GCM1_FOXI1_2 (HumanTF2 1.0)

			
Names: GCM1_FOXI1
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 13
Consensus: GTAAATAmGGGyr
Weblogo: 
PSSM: P0      A      C      G      T
01    952    279   2883     65      G
02    331    277    352   3835      T
03   3835   1159    120    124      A
04   3835    260    336    169      A
05   3835     79    209     41      A
06      6    221     10   3835      T
07   3835     24    409     14      A
08   1117   1404    945    370      m
09    273    198   3835    515      G
10      0     25   3835     50      G
11      0      6   3835     53      G
12    395   1360    299   1781      y
13   1249    657   1138    791      r
Type: Heterodimer
Binding TFs: FOXI1_TF2 (Fork head domain)
GCM1_TF1 (GCM motif protein)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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