DNA Binding Motif

						

			
Accessions: PHOX2B_4 (HT-SELEX2 May2017)

			
Names: PHOX2B
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: TAATTarATTA
Weblogo: 
PSSM: P0      A      C      G      T
01   1537    344     70  23310      T
02  23310     19    560    523      A
03  23310      0      0      0      A
04     21     84      4  23310      T
05    238   1106    441  23310      T
06  23310   4712   3802   6427      a
07  14876   2823  23310    358      r
08  23310     89   2298    387      A
09     11     13     10  23310      T
10    196    727     46  23310      T
11  23310    136    339   1767      A
Binding TFs: PHOX2B (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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