DNA Binding Motif

						

			
Accessions: MA2278.1 (JASPAR 2024)

			
Names: SoxN
Organisms: Drosophila melanogaster
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: SELEX
Length: 11
Consensus: CAATarCATTG
Weblogo: 
PSSM: P0      A      C      G      T
01      0    995      4      0      C
02    924     31     23     19      A
03    826    113     10     49      A
04      0     33      4    962      T
05    416    133    244    206      a
06    363    230    290    115      r
07     20    954     24      0      C
08   1000      0      0      0      A
09     50     21     83    844      T
10     20      8     12    958      T
11     52     16    932      0      G
Binding TFs: M9PCZ7
			
Publications: McKimmie C, Woerfel G, Russell S. Conserved genomic organisation of Group B Sox genes in insects. BMC Genet : (2005). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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