DNA Binding Motif

						

			
Accessions: 4qtr_CD (3D-footprint 20231221)

			
Names: dualENH
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Computational design of co-assembling protein-DNA nanowires
Length: 9
Consensus: aAnnnnnTt
Weblogo: 
PSSM: P0      A      C      G      T
01     57     13     13     13      a
02     96      0      0      0      A
03     24     24     24     24      n
04     24     24     24     24      n
05     24     24     24     24      n
06     24     24     24     24      n
07     24     24     24     24      n
08      0      0      0     96      T
09     13     16     13     54      t
Type: Heterodimer
Binding TFs: 4qtr_C (Homeobox domain)
4qtr_D (Homeobox domain)
Binding Sites: 4qtr_G
4qtr_H
			
Publications: Mou Y, Yu JY, Wannier TM, Guo CL, Mayo SL. Computational design of co-assembling protein-DNA nanowires. Nature 525:230-3 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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