DNA Binding Motif

						

			
Accessions: ERF_FOXI1_2_3 (HumanTF2 1.0)

			
Names: ERF_FOXI1
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 13
Consensus: trTtkmCGGAart
Weblogo: 
PSSM: P0      A      C      G      T
01    183    189    326    954      t
02    452     48    954     96      r
03     97    180     97    954      T
04    196     88    317    954      t
05     84     90    338    616      k
06    509    445    122     22      m
07     77    954     20      7      C
08      2     24    954     20      G
09     59     79    954    108      G
10    954    130     99    195      A
11    697     41     60    257      a
12    314     76    640     80      r
13     73    205    237    439      t
Type: Heterodimer
Binding TFs: FOXI1_TF2 (Fork head domain)
ERF_TF1 (Ets-domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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