DNA Binding Motif

						

			
Accessions: HOXA10_methyl_6 (HT-SELEX2 May2017)

			
Names: HOXA10
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: sgymATWAAay
Weblogo: 
PSSM: P0      A      C      G      T
01    361    601    775    511      s
02    581    486   2247    324      g
03      0   1147      0   1100      y
04   2247   1742    155    210      m
05   2247     63    222      0      A
06     23      0      0   2247      T
07   2247     22     33    988      W
08   2247     11      0     99      A
09   2247    173      0     94      A
10   2247   1295    885    907      a
11    369    859    451    569      y
Binding TFs: HOXA10 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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