DNA Binding Motif

Accessions: MA1607.1 (JASPAR 2024)
Names: Foxl2
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 14
Consensus: rwwaTGTAAACAwr
Weblogo:
PSSM: P0 A C G T
01 6235 3031 4621 4214 r
02 5913 2912 3521 5755 w
03 6433 1576 1599 8493 w
04 11158 2051 2107 2785 a
05 2985 896 1371 12849 T
06 2607 367 14648 479 G
07 1097 301 419 16284 T
08 17227 558 112 204 A
09 17212 336 187 366 A
10 17146 216 411 328 A
11 282 15698 151 1970 C
12 15623 807 401 1270 A
13 5229 4246 3844 4782 w
14 5143 4329 4529 4100 r
Type: Heterodimer
Binding TFs: O88470 (Fork head domain)
O88470
Binding Sites: MA1607.1.1
MA1607.1.10 / MA1607.1.9
MA1607.1.11
MA1607.1.10 / MA1607.1.12
MA1607.1.11 / MA1607.1.13
MA1607.1.12 / MA1607.1.14
MA1607.1.13 / MA1607.1.15
MA1607.1.16
MA1607.1.14 / MA1607.1.17
MA1607.1.18
MA1607.1.19
MA1607.1.2
MA1607.1.15 / MA1607.1.20
MA1607.1.3
MA1607.1.4
MA1607.1.5
MA1607.1.6
MA1607.1.7
MA1607.1.7 / MA1607.1.8
MA1607.1.8 / MA1607.1.9
MA1607.1.16
MA1607.1.17
MA1607.1.18
MA1607.1.19
MA1607.1.20
Publications: Wang DS, Kobayashi T, Zhou LY, Paul-Prasanth B, Ijiri S, Sakai F, Okubo K, Morohashi K, Nagahama Y. Foxl2 up-regulates aromatase gene transcription in a female-specific manner by binding to the promoter as well as interacting with ad4 binding protein/steroidogenic factor 1. Mol Endocrinol 21:712-25 (2007). [Pubmed]

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.