DNA Binding Motif
Accessions: | MA1463.2 (JASPAR 2024) |
Names: | ARGFX |
Organisms: | Homo sapiens |
Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
Notes: | HT-SELEX |
Length: | 8 |
Consensus: | cTAATTAr |
Weblogo: | |
PSSM: | P0 A C G T 01 2558 16589 1748 4423 c 02 270 1130 96 16589 T 03 16589 46 0 4 A 04 16589 0 0 0 A 05 0 0 0 16589 T 06 0 44 0 16589 T 07 16589 499 1492 1048 A 08 10340 563 6249 900 r |
Type: | Heterodimer |
Binding TFs: | A6NJG6 (Homeobox domain) A6NJG6 |
Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
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