DNA Binding Motif

						

			
Accessions: M0635 (AthalianaCistrome v4_May2016)

			
Names: NST1.ampDAP, T10279;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: CkTraawwwsAMGcA
Weblogo: 
PSSM: P0      A      C      G      T
01     50    543      0      5      C
02      0      0    375    223      k
03      0      0      0    598      T
04    245     30    317      6      r
05    232    133     90    143      a
06    297     70    146     85      a
07    236    105    102    155      w
08    163    127     49    259      w
09    206     67     92    233      w
10     38    288    158    114      s
11    594      4      0      0      A
12    429    167      2      0      M
13      0      0    578     20      G
14     69    372     49    108      c
15    454     20     24    100      A
Binding TFs: T10279 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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