DNA Binding Motif

						

			
Accessions: HOMEZ_DBD (HumanTF 1.0)

			
Names: HOMEZ
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomer or dimer; SELEX cycle: 4
Length: 12
Consensus: aAAACGATTwwa
Weblogo: 
PSSM: P0      A      C      G      T
01    914    172    189    216      a
02   1492     28     73    226      A
03   1492     18     55    176      A
04   1492     71      4    190      A
05     39   1492      8      0      C
06     23     28   1492     63      G
07   1492      0      9      9      A
08    297     22    101   1492      T
09    177    105    168   1041      T
10   1009     41     57    384      w
11   1492    357    197   2166      w
12    850    211     74    357      a
Binding TFs: HOMEZ_DBD (Homeobox KN domain, Homeodomain leucine-zipper encoding, Homez)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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