DNA Binding Motif

						

			
Accessions: Irx3_DBD (HumanTF 1.0)

			
Names: Irx3
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 4
Length: 12
Consensus: ywACATGAmAww
Weblogo: 
PSSM: P0      A      C      G      T
01     15    462     23    356      y
02    330      7    133    524      w
03    855      0      3      1      A
04      0    855      0      5      C
05    855      0      0      0      A
06     50    205      8    855      T
07    152      9    855     29      G
08    855     22     40    105      A
09    348    507     19     69      m
10    855     37     10     53      A
11    588    100     19    267      w
12    563     35     19    237      w
Binding TFs: Irx3_DBD (Homeobox domain, Homeobox KN domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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