DNA Binding Motif

						

			
Accessions: TBX1_DBD_5 (HumanTF 1.0)

			
Names: TBX1
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 4
Length: 20
Consensus: TTCACACCTmwAGGTGTGAr
Weblogo: 
PSSM: P0      A      C      G      T
01    730    472    767  11227      T
02      9      7     56  12141      T
03    329   7981    573      4      C
04   8622      2    178    216      A
05      2   8154     20      3      C
06   8518     10    349     22      A
07      8   8298     22      5      C
08   1720   7767    108    636      C
09    182    484    296  11588      T
10   3223   4316   1047    126      m
11   2692   2274    257   4777      w
12   7009   1799    794     83      A
13    542   2525   9882    210      G
14      6     82  13640      1      G
15     16    136    150  11750      T
16      0      0  13953      1      G
17    243    128     93  11623      T
18      6    135  13381    688      G
19   8730     42     24     14      A
20   5372     97   4683   1455      r
Binding TFs: TBX1_DBD (T-box)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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