DNA Binding Motif

						

			
Accessions: MA2017.1 (JASPAR 2024)

			
Names: JUB1
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 14
Consensus: dycACGGCGagtdw
Weblogo: 
PSSM: P0      A      C      G      T
01    151     79    132    147      d
02    113    153     65    178      y
03     96    236    115     62      c
04    458     30     10     11      A
05      9    492      0      8      C
06      9      8    489      3      G
07      3     12    492      2      G
08     12    476      0     21      C
09     33     10    457      9      G
10    288     36     82    103      a
11     68    122    196    123      g
12     67     47    121    274      t
13    142     91    139    137      d
14    148    102     98    161      w
Type: Heterodimer
Binding TFs: Q9SK55 (No apical meristem (NAM) protein)
Q9SK55
Binding Sites: MA2017.1.1
MA2017.1.10
MA2017.1.11
MA2017.1.12
MA2017.1.13
MA2017.1.14
MA2017.1.15
MA2017.1.16
MA2017.1.17
MA2017.1.18
MA2017.1.19
MA2017.1.2
MA2017.1.20
MA2017.1.3
MA2017.1.4
MA2017.1.5
MA2017.1.6
MA2017.1.7
MA2017.1.8
MA2017.1.9
			
Publications: Wu A, Allu AD, Garapati P, Siddiqui H, Dortay H, Zanor MI, Asensi-Fabado MA, Munné-Bosch S, Antonio C, Tohge T, Fernie AR, Kaufmann K, Xue GP, Mueller-Roeber B, Balazadeh S. JUNGBRUNNEN1, a reactive oxygen species-responsive NAC transcription factor, regulates longevity in Arabidopsis. Plant Cell 24:482-506 (2012). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.