DNA Binding Motif

						

			
Accessions: M0158 (AthalianaCistrome v4_May2016)

			
Names: bHLH122.DAP, T00194;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 14
Consensus: ttdkCmACTTGcmw
Weblogo: 
PSSM: P0      A      C      G      T
01    147     82    120    248      t
02    121    137    145    194      t
03    218     45    161    173      d
04     99    125    212    161      k
05      7    590      0      0      C
06    329    260      0      8      m
07    597      0      0      0      A
08      0    594      3      0      C
09      0      0      1    596      T
10      1      0      0    596      T
11      1      0    596      0      G
12     76    302     82    137      c
13    211    168     79    139      m
14    170    148     68    211      w
Binding TFs: T00194 (Helix-loop-helix DNA-binding domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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