DNA Binding Motif

						

			
Accessions: GCM1_CEBPB_1 (HumanTF2 1.0)

			
Names: GCM1_CEBPB
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 20
Consensus: ATGcGGGyrkrTTGCGYAAy
Weblogo: 
PSSM: P0      A      C      G      T
01   1484    165    235     19      A
02    114     81     57   1484      T
03    361     24   1123      0      G
04    290   1164    320    137      c
05    212    172   1484    161      G
06      0     28   1484     33      G
07      0     32   1484     10      G
08    227    413      7    836      y
09    632    142    411    299      r
10    192    353    397    541      k
11    723    107    682      0      r
12      0      3      2   1484      T
13      0      0     14   1484      T
14    285      5   1199      8      G
15      0   1484      0     32      C
16     33     10   1484     34      G
17      0   1096      0    388      Y
18   1484     22      7      0      A
19   1484      0     14      7      A
20      6    685    101    692      y
Type: Heterodimer
Binding TFs: CEBPB_TF2 (bZIP transcription factor, Basic region leucine zipper)
GCM1_TF1 (GCM motif protein)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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