DNA Binding Motif

						

			
Accessions: M0222 (AthalianaCistrome v4_May2016)

			
Names: GBF6.ampDAP, T20136;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: dwwgmTgACGTGkma
Weblogo: 
PSSM: P0      A      C      G      T
01    185     52    143    153      d
02    183     86     86    178      w
03    146     55     78    254      w
04     80     23    300    130      g
05    155    205    120     53      m
06     89     57      6    381      T
07      6    107    359     61      g
08    533      0      0      0      A
09      0    533      0      0      C
10      6      0    527      0      G
11      1      0      0    532      T
12      0      0    532      1      G
13      0      0    361    172      k
14    155    343      8     27      m
15    263     74     83    113      a
Binding TFs: T20136 (bZIP transcription factor, Basic region leucine zipper)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.