DNA Binding Motif

						

			
Accessions: MA0998.1 (JASPAR 2024)

			
Names: ERF096
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 10
Consensus: smGCCGcCay
Weblogo: 
PSSM: P0      A      C      G      T
01    193    300    280    227      s
02    289    468    167     76      m
03     34     13    939     13      G
04     32    905     36     27      C
05     97    850     21     32      C
06     43     10    928     19      G
07    129    591    131    149      c
08     35    903     24     38      C
09    384    176    240    200      a
10    233    254    223    290      y
Type: Heterodimer
Binding TFs: Q9LSX0 (AP2 domain)
Q9LSX0
			
Publications: Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.