DNA Binding Motif
| Accessions: | UP00015A_1 (UniPROBE 20160601) |
| Names: | 9030625L19Rik, AU019492, Ehf, ets homologous factor |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 15 |
| Consensus: | mkdwcsCGGAARtwa |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.33 0.30 0.23 0.14 m 02 0.20 0.22 0.32 0.26 k 03 0.25 0.22 0.27 0.26 d 04 0.63 0.04 0.04 0.29 w 05 0.16 0.38 0.22 0.23 c 06 0.13 0.59 0.27 0.01 s 07 0.21 0.76 0.03 0 C 08 0.01 0 0.98 0 G 09 0 0 0.99 0.01 G 10 0.98 0 0 0.01 A 11 0.88 0 0 0.11 A 12 0.25 0.05 0.69 0.01 R 13 0.12 0.15 0.05 0.67 t 14 0.38 0.11 0.23 0.28 w 15 0.40 0.19 0.22 0.19 a |
| Binding TFs: | UP00015A (Ets-domain) |
| Binding Sites: | AACTTCCG AACTTCCT AAGGAAGT ACCCGGAA ACGGAAGT ACTTCCGC ACTTCCGG ACTTCCTG AGGAAGTA ATTTCCGC CACTTCCG CCCGGAAA CCCGGAAG CCGGAAAC CCGGAAGC CGGAAGTA CTTCCGGA CTTCCGGC GGAAGTAA TTCCGGAA |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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