DNA Binding Motif

						

			
Accessions: ERF_EOMES_2 (HumanTF2 1.0)

			
Names: ERF_EOMES
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 15
Consensus: waTmrCACMGGAwry
Weblogo: 
PSSM: P0      A      C      G      T
01    301    177    129    327      w
02    158     87     71     51      a
03     40     56     36    369      T
04    315    332    170    134      m
05    356      9    191     71      r
06      2    367      1      3      C
07    360     17    105     27      A
08     23    355     54      0      C
09    159    366      0      0      M
10      0      0    367      0      G
11      6      2    368      0      G
12    367      8     23      0      A
13    337     58      0    202      w
14    259     65    539     86      r
15     26    349    179    315      y
Type: Heterodimer
Binding TFs: EOMES_TF2 (T-box)
ERF_TF1 (Ets-domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.