DNA Binding Motif

						

			
Accessions: M0655 (AthalianaCistrome v4_May2016)

			
Names: ANAC028.DAP, T00356;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 16
Consensus: CTTstkyydCAmGywA
Weblogo: 
PSSM: P0      A      C      G      T
01      0    596      0      0      C
02      0      0     81    515      T
03      0      0      0    596      T
04     21    188    352     35      s
05    144    115     54    283      t
06    135    121    155    185      k
07    148    198     94    156      y
08    119    189     67    221      y
09    215     59    159    163      d
10      4    437     72     83      C
11    596      0      0      0      A
12    359    237      0      0      m
13      0      0    584     12      G
14     80    184     51    281      y
15    307     92      0    197      w
16    506      0      1     89      A
Binding TFs: T00356 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.