DNA Binding Motif

						

			
Accessions: MGA_DBD_3 (HumanTF 1.0)

			
Names: MGA
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 3
Length: 18
Consensus: gGTGTGAAwwtTcACACc
Weblogo: 
PSSM: P0      A      C      G      T
01    995   1004   2587    324      g
02     29    120   3465     27      G
03     38    859     29   2623      T
04      7      2   3589      0      G
05    348    704     56   3208      T
06     65    383   3299    507      G
07   2381      4     81     64      A
08   1835    186    297    295      A
09   1622    100    155    816      w
10    809    141    473   1711      w
11    545    225    424   2078      t
12     74     87     22   3606      T
13    617   2364    435     79      c
14   2373      8    431    162      A
15      3   2627      0      6      C
16   2145     63    460      2      A
17     14   2681     66     17      C
18    117   2375    726   1048      c
Binding TFs: MGA_DBD (T-box)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.