DNA Binding Motif

						

			
Accessions: GCM1_ELF1_2 (HumanTF2 1.0)

			
Names: GCM1_ELF1
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 15
Consensus: kvCGGAArTGckGGt
Weblogo: 
PSSM: P0      A      C      G      T
01    226    197    387    395      k
02    313    302    533     57      v
03    278    927     46     16      C
04      6      0   1205     20      G
05     14      0   1205     73      G
06   1205     53     54     87      A
07   1205     56    100    146      A
08    803     49    403      0      r
09     42     62     72   1205      T
10    313     39   1205      3      G
11    378   1205    210    156      c
12    127     20    757    448      k
13      0     11   1205     73      G
14     22      5   1205     21      G
15     45    295    226    639      t
Type: Heterodimer
Binding TFs: ELF1_TF2 (Ets-domain, Transcription factor protein N terminal)
GCM1_TF1 (GCM motif protein)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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