DNA Binding Motif
| Accessions: | RXRA_DBD_2 (HumanTF 1.0) |
| Names: | RXRA |
| Organisms: | Homo sapiens |
| Libraries: | HumanTF 1.0 1 1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] |
| Notes: | Site type: dimeric; SELEX cycle: 3 |
| Length: | 14 |
| Consensus: | rrGGTCATGACCyy |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 2908 552 5711 258 r 02 4055 117 4473 75 r 03 99 215 10330 199 G 04 131 220 10048 622 G 05 101 226 254 9355 T 06 70 11448 240 276 C 07 6659 81 1276 76 A 08 115 1451 58 8622 T 09 215 171 10302 116 G 10 7165 166 240 227 A 11 641 11274 252 210 C 12 358 11743 320 204 C 13 153 5894 220 4613 y 14 287 6724 729 3500 y |
| Binding TFs: | RXRA_DBD (Zinc finger, C4 type (two domains)) |
| Publications: | Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] |
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