DNA Binding Motif

						

			
Accessions: MA1758.2 (JASPAR 2024)

			
Names: HSFA1E
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 14
Consensus: aGAAgcTTCTAGAA
Weblogo: 
PSSM: P0      A      C      G      T
01    662     67    236     35      a
02     11      0    987      2      G
03    987      0     13      0      A
04    939      4     26     30      A
05    124    200    588     89      g
06    210    421    204    165      c
07    124     33     11    833      T
08     39      0     11    950      T
09      2    965     33      0      C
10     48     85     13    855      T
11    852     39    108      0      A
12      2      7    980     11      G
13    978      7      7      9      A
14    774     30     87    108      A
Type: Heterodimer
Binding TFs: Q9SCW5 (HSF-type DNA-binding)
Q9SCW5
			
Publications: Wu C. Heat shock transcription factors: structure and regulation. Annu Rev Cell Dev Biol : (1995;11:441-69.). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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