DNA Binding Motif

						

			
Accessions: TrnD-Trp (DBTBS 1.0)

			
Names: TrnD-Trp
Organisms: Bacillus subtilis
Libraries: DBTBS 1.0 1
1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed]
Length: 18
Consensus: AATmArGGTGGTACCrCG
Weblogo: 
PSSM: P0      A      C      G      T
01      2      0      0      0      A
02      2      0      0      0      A
03      0      0      0      2      T
04      1      1      0      0      m
05      2      0      0      0      A
06      1      0      1      0      r
07      0      0      2      0      G
08      0      0      2      0      G
09      0      0      0      2      T
10      0      0      2      0      G
11      0      0      2      0      G
12      0      0      0      2      T
13      2      0      0      0      A
14      0      2      0      0      C
15      0      2      0      0      C
16      1      0      1      0      r
17      0      2      0      0      C
18      0      0      2      0      G
Binding TFs: TrnD-Trp
Binding Sites: trpS
yczA_2
			
Publications: Condon C, Grunberg-Manago M, Putzer H. Aminoacyl-tRNA synthetase gene regulation in Bacillus subtilis. Biochimie 78:381-9 (1996). [Pubmed]


Sarsero J.P, Merino E, Yanofsky C. A Bacillus subtilis operon containing genes of unknown function senses tRNATrp charging and regulates expression of the genes of tryptophan biosynthesis. Proceedings of the National Academy of Sciences of the United States of America 97:2656-61 (2000). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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