DNA Binding Motif

						

			
Accessions: GCM1_ELK1_2_3 (HumanTF2 1.0)

			
Names: GCM1_ELK1
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 15
Consensus: rtGcGGGCGGAAGkg
Weblogo: 
PSSM: P0      A      C      G      T
01   1208    176    870     92      r
02    405    244    390   2078      t
03    666     76   2078      0      G
04   1066   2078    820   1008      c
05    349      9   2078    113      G
06      0      0   2078      8      G
07      0     18   2078      3      G
08      0   2078      4      1      C
09      2      0   2078      3      G
10      4      4   2078     19      G
11   2078      0      0      0      A
12   2078    213     14    569      A
13    217    262   2078      0      G
14    488   1145   1529   2078      k
15    404    267   1037    371      g
Type: Heterodimer
Binding TFs: ELK1_TF2 (Ets-domain)
ELK1_Full (Ets-domain)
GCM1_TF1 (GCM motif protein)
ELK1_TF1 (Ets-domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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