DNA Binding Motif

						

			
Accessions: THRB_DBD_1 (HumanTF 1.0)

			
Names: THRB
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 4
Length: 18
Consensus: kTGACCTbATrAGGTCAy
Weblogo: 
PSSM: P0      A      C      G      T
01   2864   2112   6564   3974      k
02     56    758     36  14698      T
03    323    232  18361     84      G
04  11124    136    227   2729      A
05     34  14883     69     12      C
06     11  14905     62      9      C
07     13   3718     78  13332      T
08    311   4050   5335   6260      b
09  11474    241   1713     17      A
10     27   1699    312  14244      T
11   6477   2720   4749    383      r
12  11157     24   2276      7      A
13     11      5  17427      5      G
14      6      5  17594     24      G
15   3521    546    444  12956      T
16    396  13653   1342    381      C
17  12245      8    474     27      A
18   2742   5696   1726   4460      y
Binding TFs: THRB_DBD (Zinc finger, C4 type (two domains))
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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