DNA Binding Motif

						

			
Accessions: GCM1_ELF1_1 (HumanTF2 1.0)

			
Names: GCM1_ELF1
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 15
Consensus: rkGcGGGCGGAaGtr
Weblogo: 
PSSM: P0      A      C      G      T
01    477    163    446     15      r
02     42     66    283    579      k
03    128     46    591     13      G
04    126    464    191    173      c
05     61      3    595     80      G
06     30      0    606     15      G
07      0     36    593      1      G
08     39    573     18     73      C
09      8      1    606     50      G
10      8     26    609     37      G
11    594     66     84    101      A
12    573     77     94    100      a
13    107     90    565     19      G
14     60    155    178    544      t
15    213     69    276     47      r
Type: Heterodimer
Binding TFs: ELF1_TF2 (Ets-domain, Transcription factor protein N terminal)
GCM1_TF1 (GCM motif protein)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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