DNA Binding Motif

						

			
Accessions: MA1573.2 (JASPAR 2024)

			
Names: Thap11
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 14
Consensus: ACTACAabTCCCAg
Weblogo: 
PSSM: P0      A      C      G      T
01    588     38     20     14      A
02     20    603     18     19      C
03      5     39      6    610      T
04    627     17     10      6      A
05      4    639      9      8      C
06    609     13     29      9      A
07    414     46     56    144      a
08     70    209    165    216      b
09     18     20     19    603      T
10      5    631      2     22      C
11      8    642      5      5      C
12      9    622     10     19      C
13    475     16    147     22      A
14     74     68    421     97      g
Type: Heterodimer
Binding TFs: Q9JJD0 (THAP domain)
Q9JJD0
Binding Sites: MA1573.2.1
MA1573.2.10 / MA1573.2.11 / MA1573.2.18 / MA1573.2.19
MA1573.2.10 / MA1573.2.11 / MA1573.2.12 / MA1573.2.19 / MA1573.2.2 / MA1573.2.20 / MA1573.2.3 / MA1573.2.8
MA1573.2.12 / MA1573.2.13
MA1573.2.13 / MA1573.2.14
MA1573.2.14 / MA1573.2.15
MA1573.2.15 / MA1573.2.16
MA1573.2.16 / MA1573.2.17
MA1573.2.17 / MA1573.2.18
MA1573.2.20
MA1573.2.3 / MA1573.2.4
MA1573.2.4 / MA1573.2.5
MA1573.2.5 / MA1573.2.6
MA1573.2.6 / MA1573.2.7
MA1573.2.7 / MA1573.2.8
MA1573.2.9
MA1573.2.1
MA1573.2.2
MA1573.2.9
			
Publications: Dejosez M, Levine SS, Frampton GM, Whyte WA, Stratton SA, Barton MC, Gunaratne PH, Young RA, Zwaka TP. Ronin/Hcf-1 binds to a hyperconserved enhancer element and regulates genes involved in the growth of embryonic stem cells. Genes Dev 24:1479-84 (2010). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.