DNA Binding Motif
| Accessions: | MA1919.2 (JASPAR 2024) |
| Names: | Tbox-a |
| Organisms: | Ciona intestinalis |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | SELEX |
| Length: | 9 |
| Consensus: | rGGTGTGAa |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 509 77 274 141 r 02 91 82 770 56 G 03 13 28 936 23 G 04 15 93 28 864 T 05 10 5 976 10 G 06 68 195 54 683 T 07 51 104 703 142 G 08 906 17 54 24 A 09 657 83 136 124 a |
| Type: | Heterodimer |
| Binding TFs: | Q95YF5 (T-box) Q95YF5 |
| Publications: | José-Edwards DS, Oda-Ishii I, Kugler JE, Passamaneck YJ, Katikala L, Nibu Y, Di Gregorio A. Brachyury, Foxa2 and the cis-Regulatory Origins of the Notochord. PLoS Genet : (2015). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.