DNA Binding Motif

						

			
Accessions: 6fbr_B (3D-footprint 20231221)

			
Names: Retinoic acid receptor RXR-alpha
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal Structure of the Human Retinoid X Receptor DNA-Binding Domain Bound to the Human MEp DR1 Response Element, pH 4.2
Length: 5
Consensus: tGaAC
Weblogo: 
PSSM: P0      A      C      G      T
01     13     13     13     57      t
02      0      0     96      0      G
03     54     13     13     16      a
04     96      0      0      0      A
05      0     96      0      0      C
Binding TFs: 6fbr_B (Zinc finger, C4 type (two domains))
Binding Sites: 6fbr_C
6fbr_D
			
Publications: Osz J, McEwen AG, Wolf J, Poussin-Courmontagne P, Peluso-Iltis C, Chebaro Y, Kieffer B, Rochel N. Modulation of RXR-DNA complex assembly by DNA context. Mol Cell Endocrinol : (2019). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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