DNA Binding Motif

						

			
Accessions: 3do7_AB (3D-footprint 20231221)

			
Names: Avian reticuloendotheliosis viral (V-rel) oncogene related B
Organisms: Mus musculus, Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: X-ray structure of a NF-kB p52/RelB/DNA complex
Length: 9
Consensus: GGGAnTTCC
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0     96      0      G
02      0      0     96      0      G
03      0      0     96      0      G
04     69      9      9      9      A
05     24     24     24     24      n
06     11      9      9     67      T
07     11      9      9     67      T
08      0     96      0      0      C
09      0     96      0      0      C
Type: Heterodimer
Binding TFs: 3do7_A (Rel homology domain (RHD))
3do7_B (Rel homology domain (RHD))
Binding Sites: 3do7_C
3do7_D
			
	
			


			

				

				
				
				
				

			

			

		

	
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