DNA Binding Motif

						

			
Accessions: MEIS1_HOXA13 (HumanTF2 1.0)

			
Names: MEIS1_HOXA13
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 15
Consensus: symrTaAaacTGTCA
Weblogo: 
PSSM: P0      A      C      G      T
01    192    648    446    174      s
02    137    371     96    723      y
03    538    314     33    209      m
04    588     37    506     67      r
05      0      9     16   1094      T
06   1094    436     62    183      a
07   1094    118    147      0      A
08   1094    195    185    153      a
09    482    204    269    139      a
10    135    713    200     46      c
11     23    109      0   1094      T
12      3     36   1094      0      G
13    149     59     14   1094      T
14      0   1094     45      0      C
15   1094     10     82    121      A
Type: Heterodimer
Binding TFs: HOXA13_TF2 (Homeobox domain, Hox protein A13 N terminal)
HOXA13_Full (Homeobox domain, Hox protein A13 N terminal)
MEIS1_TF1 (Homeobox domain, Homeobox KN domain)
MEIS1_Crystal (Homeobox domain, Homeobox KN domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.