DNA Binding Motif

Accessions: RFX5_methyl_2 (HT-SELEX2 May2017)
Names: RFX5
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 17
Consensus: myrgyaACsGTtrCyAt
Weblogo:
PSSM: P0 A C G T
01 614 521 366 363 m
02 175 1061 147 727 y
03 726 105 1099 83 r
04 517 333 1266 211 g
05 128 1681 107 661 y
06 1677 99 646 290 a
07 1838 142 151 160 A
08 55 1799 366 179 C
09 196 999 805 186 s
10 81 576 1823 34 G
11 183 131 141 1833 T
12 314 445 53 1711 t
13 839 108 1654 166 r
14 228 1765 446 132 C
15 24 974 72 860 y
16 1640 214 284 196 A
17 432 436 353 643 t
Binding TFs: RFX5 (RFX DNA-binding domain, Poxvirus D5 protein-like)
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

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