DNA Binding Motif

						

			
Accessions: MA0779.2 (JASPAR 2024)

			
Names: PAX1
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 16
Consensus: sGTCACGCwTSAsTGm
Weblogo: 
PSSM: P0      A      C      G      T
01    314   3157   1423    327      s
02      3      0   5266     79      G
03    234     80      0   4396      T
04      3   4490      1    475      C
05   3574    213      2      0      A
06      2   4489      0    651      C
07      3      2   5304      3      G
08      0   4404   1017      0      C
09   2215     81     43   1529      w
10     11    425      2   4290      T
11      1   1769   4652     54      S
12   3579      2    595      0      A
13    824   1629   1230    744      s
14     74    612     32   4185      T
15    849     11   4289    880      G
16   1453   2561   1147      0      m
Type: Heterodimer
Binding TFs: P15863 ('Paired box' domain, Homeodomain-like domain)
P15863
			
Publications: Wolf LV, Yang Y, Wang J, Xie Q, Braunger B, Tamm ER, Zavadil J, Cvekl A. Identification of pax6-dependent gene regulatory networks in the mouse lens. PLoS One : (2009;4(1):e4159.). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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