DNA Binding Motif

						

			
Accessions: IRF5_methyl_3 (HT-SELEX2 May2017)

			
Names: IRF5
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 14
Consensus: syGAAACCGAAACy
Weblogo: 
PSSM: P0      A      C      G      T
01    952   1239   1239    550      s
02    366   2764     89   1217      y
03    280     55   3981     45      G
04   3981    126     90     76      A
05   3981     62    140    893      A
06   3981     18      6      9      A
07    109   3981    727     65      C
08    359   3981     41    997      C
09    560      5   3981     15      G
10   3981    147    102     17      A
11   3981     21    317   1387      A
12   3981     18      8     20      A
13    128   3981    701     81      C
14    427   1588    246   2394      y
Binding TFs: IRF5 (Interferon regulatory factor transcription factor)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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