DNA Binding Motif

Accessions: MA1549.2 (JASPAR 2024)
Names: POU6F1
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 7
Consensus: TAATGAG
Weblogo:
PSSM: P0 A C G T
01 164 273 10 6413 T
02 6413 179 255 0 A
03 6413 0 0 0 A
04 0 0 298 6413 T
05 67 206 5799 615 G
06 6413 96 0 411 A
07 314 851 6413 1855 G
Type: Heterodimer
Binding TFs: Q14863 (Homeobox domain, Pou domain - N-terminal to homeobox domain)
Q14863
Publications: Mistri TK, Devasia AG, Chu LT, Ng WP, Halbritter F, Colby D, Martynoga B, Tomlinson SR, Chambers I, Robson P, Wohland T. Selective influence of Sox2 on POU transcription factor binding in embryonic and neural stem cells. EMBO Rep 16:1177-91 (2015). [Pubmed]

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