DNA Binding Motif
| Accessions: | MA0905.2 (JASPAR 2024) |
| Names: | HOXC10 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | HT-SELEX |
| Length: | 9 |
| Consensus: | rTCrTwAAa |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1495 1044 3211 15 r 02 26 245 0 3211 T 03 315 3211 12 152 C 04 2638 6 3211 24 r 05 27 0 0 3211 T 06 2165 5 4 1047 w 07 3211 3 5 102 A 08 3211 76 86 187 A 09 3211 551 532 1069 a |
| Type: | Heterodimer |
| Binding TFs: | Q9NYD6 (Homeobox domain) Q9NYD6 |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
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