DNA Binding Motif

						

			
Accessions: MA1891.1 (JASPAR 2024)

			
Names: Klf3/8/12
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: SELEX
Length: 20
Consensus: mmmkrCCACrCCCammmccm
Weblogo: 
PSSM: P0      A      C      G      T
01    309    521     72     98      m
02    315    422    121    142      m
03    290    310    233    167      m
04    221    153    250    376      k
05    267    131    563     39      r
06    118    822     20     40      C
07     59    903     13     26      C
08    910     64     20      5      A
09     11    969      8     12      C
10    398     34    544     25      r
11     12    981      3      3      C
12      7    985      4      4      C
13     14    942      2     42      C
14    454    248     51    247      a
15    313    263    185    240      m
16    296    272    222    211      m
17    256    366    214    164      m
18    204    468    216    112      c
19    246    520    141     92      c
20    256    520    143     81      m
			
Publications: José-Edwards DS, Oda-Ishii I, Kugler JE, Passamaneck YJ, Katikala L, Nibu Y, Di Gregorio A. Brachyury, Foxa2 and the cis-Regulatory Origins of the Notochord. PLoS Genet : (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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